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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7947811 chr11:48167738 C/T FOLH1B chr11:89372395-89431886:+ -0.41 -5.94 5.65E-9 Box Plot
THCA rs79481454 chr2:132184992 AG/A CCDC74B chr2:130896860-130902707:- 0.45 7.8 3.83E-14 Box Plot
THCA rs79490469 chr2:101132948 G/T LOC285359 chr3:101431278-101432259:+ 0.35 6.68 6.7E-11 Box Plot
THCA rs7950258 chr11:48481492 C/A FOLH1B chr11:89372395-89431886:+ 0.42 6.16 1.59E-9 Box Plot
THCA rs7950367 chr11:48921394 T/A FOLH1B chr11:89372395-89431886:+ 0.45 6.51 1.87E-10 Box Plot
THCA rs7950873 chr11:77412851 A/G INTS4L1 chr7:64601603-64694600:+ 0.64 9.9 3.83E-21 Box Plot
THCA rs7950947 chr11:49668369 C/T FOLH1B chr11:89372395-89431886:+ -0.33 -6.04 3.04E-9 Box Plot
THCA rs7951033 chr11:77534444 G/A INTS4L1 chr7:64601603-64694600:+ -0.62 -10.05 1.05E-21 Box Plot
THCA rs7951944 chr11:48585719 T/C FOLH1B chr11:89372395-89431886:+ 0.43 6.29 7.02E-10 Box Plot
THCA rs7953524 chr12:25937301 G/A FAM71E1 chr19:50970042-50980010:- 0.25 5.88 7.72E-9 Box Plot
THCA rs7955865 chr12:56468706 A/T RPS26P11 chrX:71264395-71264742:+ -0.53 -9.53 7.77E-20 Box Plot
THCA rs79566010 chr6:170819775 G/A NCRNA00115 chr1:761587-762902:- 0.59 6.73 4.8E-11 Box Plot
THCA rs79567798 chr5:18435318 A/C GNB4 chr3:179113877-179169378:- 0.48 5.87 8.01E-9 Box Plot
THCA rs796810 chr12:28551886 A/G PKIG chr20:43160426-43252888:+ -0.47 -5.88 7.88E-9 Box Plot
THCA rs79704124 chr6:47571625 G/A TUT1 chr11:62342517-62359649:- -0.38 -5.93 5.94E-9 Box Plot